Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sspGPutative polyketide-based spore pigment synthesis protein; PMID: 1644304; PMID:15365693; PMID: 8344517; spore pigment. (384 aa)    
Predicted Functional Partners:
sppE
Putative polyketide synthesis cyclase; PMID: 2077356; PMID: 1644304; PMID: 7881555; spore pigment.
     
 0.904
sppH
Putative whiE protein II; PMID: 1644304; PMID:15365693; PMID: 8344517; PMID:12323376; spore pigment.
  
    0.772
sppA
Putative polyketide beta-ketoacyl synthase 1; PMID:12323376; PMID:15365693; PMID: 8344517; PMID:11959542; spore pigment; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.767
sppB
Putative polyketide beta-ketoacyl synthase 2; PMID: 8344517; PMID: 1644304; PMID: 2077356; PMID:15365693; PMID: 7592377; spore pigment; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.767
sppD
Putative polyketide cyclase; PMID: 1644304; PMID: 2077356; PMID:12323376; spore pigment.
  
    0.729
sppC
Putative polyketide synthase acyl carrier protein; PMID: 2077356; PMID: 1644304; PMID: 8344517; PMID: 1527048; spore pigment.
       0.725
CBG69421.1
Putative sortase-like secreted protein.
     
 0.637
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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