Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CBG71425.1Putative acetyltransferase. (160 aa)    
Predicted Functional Partners:
SCAB_4501
Putative secreted protein.
  
    0.525
CBG75456.1
Putative membrane protein.
  
     0.513
CBG69233.1
Hypothetical protein.
  
     0.508
SCAB_4561
Putative secreted protein.
  
    0.502
CBG69661.1
Conserved hypothetical protein.
  
    0.493
CBG71423.1
Conserved hypothetical protein.
 
     0.471
CBG69232.1
Hypothetical protein.
  
    0.467
CBG70928.1
Conserved hypothetical protein.
  
     0.448
CBG72725.1
Conserved hypothetical protein.
  
     0.439
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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