Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CBG71439.1Putative two component sensor kinase. (390 aa)    
Predicted Functional Partners:
CBG71438.1
Putative two component response regulator.
 
   0.956
CBG75789.1
Putative two-component response regulator.
 
   0.781
CBG75371.1
Putative two component response regulator; PMID:16723579.
 
   0.779
SCAB_8261
Putative two component system response regulator.
 
   0.773
CBG71435.1
Putative two component response regulator.
 
   0.710
CBG75816.1
Putative two component system response regulator.
 
   0.710
SCAB_1061
Putative two component system response regulator.
 
   0.709
CBG71042.1
Putative two component system response regulator.
 
   0.702
CBG70474.1
Putative two component system histidine kinase.
  
     0.699
CBG71276.1
Putative two component system response regulator.
 
   0.685
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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