Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CBG71441.1Putative transcriptional regulator. (111 aa)    
Predicted Functional Partners:
CBG72525.1
Putative membrane protein; PMID:8181754.
   
    0.657
CBG75519.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
    0.650
CBG69932.1
Putative MarR family transcriptional regulator.
   
    0.618
CBG73995.1
Putative ArsR-family regulator.
   
    0.614
CBG68473.1
Putative transcriptional regulator.
   
    0.612
CBG75891.1
Putative AraC-family regulatory protein.
   
    0.612
CBG75794.1
Putative glyxalase.
  
    0.604
CBG68904.1
Putative SIR2 family transcriptional regulator.
  
    0.598
SCAB_4811
Conserved hypothetical protein.
  
    0.598
CBG70936.1
Putative regulator.
   
    0.526
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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