close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG71478.1Conserved hypothetical protein. (201 aa)    
Predicted Functional Partners:
CBG70328.1
Putative membrane protein; PMID:12591872; PMID:2836730; cluster 0500 with SCAB21751; similarity could be from low complexity? mask and retry. Contains repeat region codons 400-460.
  
     0.757
CBG69290.1
Putative membrane protein; Cluster 0500 with SCAB32271.
  
     0.756
CBG70364.1
Putative MFS transporter; PMID: 12936980; cluster 0512 with SCAB22061.
  
     0.751
CBG69321.1
Putative major facilitator transporter; PMID: 12446651; cluster 0512 with SCAB32641.
  
     0.750
CBG70356.1
Putative ligand-binding membrane protein; Cluster 0505 with SCAB21981.
  
     0.749
CBG69381.1
Hypothetical protein.
  
     0.736
CBG71578.1
Conserved hypothetical protein.
  
     0.735
CBG69313.1
Putative ligand-binding membrane protein; Cluster 0505 with SCAB32561.
  
     0.733
CBG69346.1
Putative glycosyl transferase; PMID:16024079; cluster 0529 with SCAB32941.
  
     0.726
CBG70366.1
Putative MarR family transcriptional regulator; Cluster 0514 with SCAB22081.
  
     0.726
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.