Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CBG71483.1Putative beta-galactosidase; PMID:11282601. (1311 aa)    
Predicted Functional Partners:
CBG72627.1
Putative sugar hydrolase; PMID:15215596.
 
 0.940
CBG73393.1
Putative aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.938
CBG70616.1
Putative secreted glycosylhydrolase.
 
 0.935
hexA
beta-N-acetylhexosaminidase; PMID:9795260; PMID:967738; PMID:11124970; PMID:12171933.
 
 0.932
CBG71289.1
Conserved hypothetical protein.
  
 
 0.912
aga
Putative alpha-galactosidase.
 
 
 0.861
CBG68391.1
Putative glycosylhyrdolase.
 
 
 0.845
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.814
CBG69063.1
Putative oxidoreductase.
    
  0.802
SCAB_3891
Probable secreted alpha-galactosidase.
 
 
 0.776
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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