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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG71483.1Putative beta-galactosidase; PMID:11282601. (1311 aa)    
Predicted Functional Partners:
CBG73393.1
Putative aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.938
CBG71289.1
Conserved hypothetical protein.
  
 
 0.912
aga
Putative alpha-galactosidase.
 
 
 0.862
CBG68391.1
Putative glycosylhyrdolase.
 
 
 0.845
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.816
CBG69063.1
Putative oxidoreductase.
    
  0.804
SCAB_3891
Probable secreted alpha-galactosidase.
 
 
 0.776
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.768
CBG69161.1
Putative glycosyl hydrolase (family 35); Belongs to the glycosyl hydrolase 35 family.
 
 
 0.763
CBG69162.1
Putative glycosyl hydrolase (family 42).
 
 
 0.757
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.