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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_4441Putative oxidoreductase, molybdopterin binding subunit. (326 aa)    
Predicted Functional Partners:
SCAB_4431
Putative oxidoreductase.
 0.997
SCAB_4451
Putative oxidoreductase, iron-sulphur binding subunit.
 
 0.995
CBG75167.1
Putative oxidoreductase.
 0.988
CBG75799.1
Putative aldehyde oxidase/xanthine dehydrogenase, pseudogene.
 0.988
CBG75165.1
Putative oxidoreductase, iron-sulphur binding subunit.
 
 0.986
CBG75797.1
Putative oxidoreductase, iron-sulphur binding subunit.
 
 0.982
CBG68979.1
Putative uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
    
 0.914
CBG75166.1
Putative oxidoreductase, molybdopterin binding subunit.
  
  
 
0.906
SCAB_2461
Putative nucleotide deaminase.
    
 0.904
ybeK
Putative nucleoside hydrolase.
     
  0.900
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.