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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_4451Putative oxidoreductase, iron-sulphur binding subunit. (214 aa)    
Predicted Functional Partners:
SCAB_4431
Putative oxidoreductase.
 0.999
CBG75167.1
Putative oxidoreductase.
 0.998
CBG75799.1
Putative aldehyde oxidase/xanthine dehydrogenase, pseudogene.
 0.997
SCAB_4441
Putative oxidoreductase, molybdopterin binding subunit.
 
 0.995
CBG69046.1
Putative oxidoreductase.
 
 0.988
CBG72630.1
Putative oxidoreductase.
 
 0.988
CBG75166.1
Putative oxidoreductase, molybdopterin binding subunit.
 
 0.982
CBG75798.1
Putative possible oxidoreductase, molybdopterin binding subunit.
 
 0.982
CBG69048.1
Putative oxidoreductase subunit.
 
 0.932
CBG68979.1
Putative uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
    
 0.910
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.