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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG71519.1Putative redoxin. (199 aa)    
Predicted Functional Partners:
msrA
Putative methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 0.963
CBG68821.1
Putative respiratory chain oxidoreductase; TTA-Leu codon(s) 59 may indicate regulation by BldA.
  
 
 0.878
CBG71715.1
Putative secreted protein.
 
 
 0.847
CBG70946.1
Putative cytochrome related protein.
 
  
 0.842
CBG70944.1
Putative cytochrome assembly protein.
 
  
 0.836
CBG70945.1
Putative cytochrome assembly protein.
 
  
 0.813
CBG70950.1
Putative bisphosphoglycerate mutase.
  
 
 0.792
ctaC
Putative cytochrome c oxidase subunit II.
 
 
 
 0.780
CBG69170.1
Putative SelR-type methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
   
 0.756
CBG71518.1
Putative secreted protein.
       0.723
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.