Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG71553.1Pectate lyase maybe pathogenicity related. (455 aa)    
Predicted Functional Partners:
CBG74842.1
Putative secreted pectinesterase A; PMID:2045776; possibly pathogenicity associated.
  
  0.919
CBG74049.1
Putative secreted pectinesterase.
  
  0.909
CBG74050.1
Putative secreted pectinesterase.
  
  0.894
CBG74045.1
Putative secreted bifunctional pectate lyase/pectinesterase; No full length matches: N term, Erwinia pectate lyase P0C1A4; C term, Bacillus pectinesterase domain AB062880; TTA-Leu codon(s) 9 may indicate regulation by BldA.
 
  
 
0.774
CBG74047.1
Putative secreted lipolytic enzyme.
 
   
 0.749
CBG75195.1
Putative secreted lyase.
  
   
 0.711
CBG74046.1
Putative secreted solute-binding protein.
 
     0.699
CBG74852.1
Putative secreted glycosylhydrolase; PMID:8457214.
  
   
 0.695
CBG75158.1
Putative secreted glycosylhydrolase.
  
   
 0.695
CBG74043.1
Conserved hypothetical protein; Cluster 0844 with SCAB77621.
 
     0.692
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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