Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBG71572.1Conserved hypothetical protein. (163 aa)    
Predicted Functional Partners:
CBG71571.1
Putative membrane protein.
       0.758
apeB
Putative aminopeptidase.
       0.674
CBG69924.1
Putative membrane-bound hydrophilic protein.
  
     0.475
CBG72948.1
Putative sortase-sorted protein; Possible sortase signal LAETG.
  
     0.471
CBG71569.1
Putative acyl-CoA dehydrogenase.
       0.416
CBG69726.1
Conserved hypothetical protein; PMID: 10099135.
  
     0.415
CBG71574.1
Conserved hypothetical protein.
 
     0.403
CBG69949.1
Putative large Ala/Glu-rich protein.
 
    0.402
CBG71720.1
Conserved hypothetical protein.
  
     0.402
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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