STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG71595.1Putative transcriptional regulator. (161 aa)    
Predicted Functional Partners:
bkdA
E1-alpha branched-chain alpha keto acid dehydrogenase; PMID: 8002616.
 
   
 0.785
CBG74814.1
Putative AsnC-family regulatory protein.
  
     0.762
CBG75739.1
Putative leucine-responsive regulatory protein.
  
     0.762
CBG75089.1
Conserved hypothetical protein.
  
     0.761
CBG74520.1
Putative AsnC-family regulator.
  
     0.757
SCAB_3101
Putative AsnC-family regulator.
  
     0.756
bkdB
E1-beta branched-chain alpha keto acid dehydrogenase; PMID: 8002616.
     
 0.752
CBG71590.1
Putative molybdenum cofactor biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.677
CBG71591.1
Putative molybdopterin-guanine dinucleotide biosynthesis protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
       0.677
CBG69689.1
Putative transcriptional regulator.
  
     0.645
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.