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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG71610.1Putative secreted protein. (174 aa)    
Predicted Functional Partners:
CBG71609.1
Conserved hypothetical protein.
 
   
 0.986
CBG71611.1
Putative protein phosphatase.
 
 
 0.940
CBG70083.1
Putative 2-oxoglutarate dehydrogenase.
    
 
 0.902
CBG71617.1
Putative penicillin-binding kinase.
 
 
 
 0.868
CBG71612.1
Putative cell cycle protein; Belongs to the SEDS family.
 
   
 0.867
CBG73769.1
Putative serine/threonine protein kinase.
 
 
 
 0.867
SCAB_0931
Putative serine/threonine protein kinase.
 
 
 
 0.863
CBG71583.1
Putative beta-lactam-binding protein kinase.
 
 
 
 0.862
CBG71582.1
Putative serine/threonine protein kinase.
 
 
 
 0.800
CBG70802.1
Putative serine/threonine protein kinase.
 
 
 
 0.784
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.