Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG71619.1Putative sortase; TTA-Leu codon(s) 179 may indicate regulation by BldA. (425 aa)    
Predicted Functional Partners:
CBG71621.1
Putative membrane protein.
 
   
 0.931
CBG71622.1
Putative sortase.
 
    
0.876
CBG71620.1
Putative glutamine amidotransferase.
       0.874
CBG71618.1
Putative sortase.
 
    
0.843
CBG71623.1
Putative secreted protein.
       0.837
crgA
Putative membrane protein; Involved in cell division; Belongs to the CrgA family.
       0.697
CBG74335.1
Putative transporter transmembrane subunit.
  
     0.549
CBG74484.1
Putative secreted protein.
  
     0.508
CBG69749.1
Putative heat shock protein (hsp90-family).
      
 0.433
CBG69511.1
Putative integral membrane protein.
  
     0.429
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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