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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG71625.1Putative integral membrane protein. (297 aa)    
Predicted Functional Partners:
CBG73740.1
Putative integral membrane protein.
  
   
 0.777
CBG71626.1
Putative peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
   0.756
CBG73883.1
Putative two-component system response regulator.
      
 0.656
CBG71627.1
Conserved hypothetical protein.
  
    0.652
CBG69200.1
Putative integral membrane rhomboid family protein.
  
   
0.566
CBG73552.1
Putative cell wall glycoprotein hydrolase.
  
   0.508
CBG70918.1
Putative integral membrane protein.
      
 0.463
CBG70214.1
Conserved hypothetical protein.
   
 
 0.423
tatA
Putative protein-translocation system component; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.423
CBG70020.1
Conserved hypothetical protein.
  
    0.405
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.