Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_4591Conserved hypothetical protein. (274 aa)    
Predicted Functional Partners:
SCAB_4581
Conserved hypothetical protein.
 
     0.835
cpo
Non-heme chloroperoxidase.
 
     0.795
SCAB_4611
Probable transcriptional regulator; TTA-Leu codon(s) 22 may indicate regulation by BldA.
 
     0.667
CBG74925.1
Putative polyketide synthase.
  
 0.558
CBG75341.1
Putative type I polyketide synthase.
  
 0.558
SCAB_8021
Conserved hypothetical protein.
  
     0.495
CBG70113.1
Conserved hypothetical protein; PMID: 14597396.
  
     0.431
CBG75412.1
Conserved hypothetical protein.
  
     0.426
CBG71460.1
Putative polyketide synthase; PMID:14652074; PMID:10767533; many ~30% similar.
  
 
 0.418
CBG74212.1
Conserved hypothetical protein.
  
    0.415
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.