Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG71683.1Putative membrane protein. (125 aa)    
Predicted Functional Partners:
cysA
Putative cystathionine/methionine gamma-synthase/lyase.
       0.874
CBG71682.1
Low molecular weight protein tyrosine-phosphatase.
       0.874
CBG71684.1
Conserved hypothetical protein.
       0.776
CBG71680.1
Putative LysR-family transcriptional regulator; TTA-Leu codon(s) 5, 89 may indicate regulation by BldA; Belongs to the LysR transcriptional regulatory family.
       0.728
CBG71685.1
Putative membrane protein.
       0.680
CBG71679.1
Putative NUDIX hydrolase.
       0.661
CBG70687.1
Putative integral membrane protein.
  
  
 0.660
CBG70501.1
Putative membrane protein; TTA-Leu codon(s) 67 may indicate regulation by BldA.
  
  
 0.658
CBG70576.1
Putative Psp-like protein.
  
  
 0.658
CBG70686.1
Putative two-component system sensor kinase.
  
  
 0.658
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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