Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG71702.1Putative MerR-family transcriptional regulator. (313 aa)    
Predicted Functional Partners:
CBG71704.1
Conserved hypothetical protein.
 
     0.851
CBG71703.1
Putative oxidoreductase.
 
     0.848
kptA
Putative phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
       0.739
CBG71700.1
Putative monooxygenase.
       0.710
CBG72359.1
Conserved hypothetical protein.
 
     0.601
CBG71395.1
Putative oxidoreductase.
 
     0.591
CBG69837.1
Putative transcriptional regulator.
  
     0.559
CBG71699.1
Putative hydrolase.
       0.517
SCAB_8541
Putative tetR-family transcriptional regulator.
  
     0.504
CBG70216.1
Conserved hypothetical protein.
  
     0.449
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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