Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CBG71771.1Putative two component system sensor kinase. (572 aa)    
Predicted Functional Partners:
CBG71770.1
Putative two component system response regulator.
 
 
 0.962
CBG69622.1
Putative sensory histidine kinase.
   
 
 0.875
CBG68255.1
Putative two component system response regulator.
 
 
 0.838
CBG71772.1
Putative polysaccharide biosynthesis protein.
 
    0.825
SCAB_0821
Conserved hypothetical protein; PAS domain may indicate role in signal detection.
  
 
 0.805
CBG68306.1
Putative two component system response regulator.
 
 
 0.799
CBG71773.1
Putative integral membrane protein.
 
  
 0.794
CBG68589.1
Putative POSSIBLE TWO COMPONENT SYSTEM RESPONSE TRANSCRIPTIONAL POSITIVE REGULATOR PHOP.
 
 
 0.787
CBG68594.1
Putative two-component system response regulator.
 
 
 0.787
CBG71532.1
Putative two-component response regulator.
 
 
 0.786
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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