Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG71773.1Putative integral membrane protein. (746 aa)    
Predicted Functional Partners:
CBG71772.1
Putative polysaccharide biosynthesis protein.
 
  
 0.952
CBG68591.1
Putative glycosyl transferase.
 
  
 0.852
CBG71771.1
Putative two component system sensor kinase.
 
  
 0.794
CBG71770.1
Putative two component system response regulator.
 
   
 0.777
CBG71774.1
Putative major facilitator efflux protein.
     
 0.489
CBG71769.1
Conserved hypothetical protein.
       0.482
CBG71768.1
Conserved hypothetical protein.
       0.438
CBG72608.1
Putative bi-functional transferase/deacetylase.
  
  
 0.428
CBG72609.1
Putative integral membrane protein.
  
  
 0.428
CBG75892.1
Putative membrane protein.
  
     0.403
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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