Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tadAPutative deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (183 aa)    
Predicted Functional Partners:
CBG71786.1
Conserved hypothetical protein.
       0.844
CBG68446.1
Conserved hypothetical protein; PMID:15123265.
 
      0.733
CBG68900.1
Putative transferase; Belongs to the glycerate kinase type-1 family.
 
    0.717
CBG71784.1
Putative secreted protein.
       0.701
CBG71787.1
Hypothetical protein.
       0.686
CBG73191.1
PhoH-like protein.
  
     0.673
CBG71783.1
Conserved hypothetical protein.
       0.672
rsmI
Putative methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
 
  
 0.662
CBG71782.1
SigF-like sigma factor; PMID: 7476207; PMID:14597396; Belongs to the sigma-70 factor family.
 
     0.660
hisE
phosphoribosyl-ATP pyrophosphatase.
   
  
 0.643
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.