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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG71871.1Putative secreted protein. (155 aa)    
Predicted Functional Partners:
CBG71872.1
Hypothetical protein.
       0.869
CBG71869.1
Conserved hypothetical protein.
       0.858
CBG71870.1
Hypothetical protein.
       0.858
CBG71868.1
Hypothetical protein.
       0.846
CBG71867.1
Hypothetical protein.
       0.796
CBG71874.1
Putative phage protein.
       0.781
CBG71873.1
Hypothetical protein.
       0.773
CBG71875.1
Putative phage capsid protein.
       0.662
CBG71876.1
Putative phage prohead protease.
       0.605
CBG71877.1
Putative phage protein.
       0.603
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.