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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG71878.1Putative secreted protein. (44 aa)    
Predicted Functional Partners:
CBG71875.1
Putative phage capsid protein.
       0.773
CBG71876.1
Putative phage prohead protease.
       0.773
CBG71877.1
Putative phage protein.
       0.773
CBG71879.1
Putative phage terminase.
       0.693
CBG71880.1
Hypothetical protein.
       0.693
CBG71881.1
Putative phage protein.
       0.693
CBG71874.1
Putative phage protein.
       0.572
CBG71871.1
Putative secreted protein.
       0.568
CBG71872.1
Hypothetical protein.
       0.568
CBG71873.1
Hypothetical protein.
       0.568
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.