Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAB_4861Putative ABC transporter ATP-binding protein. (319 aa)    
Predicted Functional Partners:
SCAB_4881
Putative membrane protein.
 
 
 0.962
SCAB_4871
Putative membrane protein.
 
 
 0.958
SCAB_1041
Putative ABC transport system integral membrane protein (fragment).
  
 
 0.903
CBG71377.1
Putative integral membrane protein.
  
 
 0.903
SCAB_4851
ABC-transporter ATP binding protein.
 
    
0.586
CBG72463.1
Putative ABC transport system transmembrane subunit.
 
 
 0.527
CBG72952.1
Putative globin; PMID:15590662.
       0.526
CBG74779.1
Putative ABC transport system permease protein.
 
 
 0.514
CBG72953.1
Putative O-methyltransferase.
       0.465
CBG71950.1
Putative ABC transporter transmembrane subunit.
  
 
 0.445
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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