Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG71964.1Putative tetR-family regulator. (266 aa)    
Predicted Functional Partners:
CBG71963.1
Putative regulator; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.559
CBG71965.1
Putative disulfide oxidoreductase.
       0.526
CBG71966.1
Putative phosphatase.
       0.526
CBG73432.1
Putative transcriptional regulator; PMID:1592819; PMID:1592820.
  
    0.448
CBG69726.1
Conserved hypothetical protein; PMID: 10099135.
  
 
   0.442
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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