Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CBG71966.1Putative phosphatase. (557 aa)    
Predicted Functional Partners:
CBG71160.1
Anti-anti-sigma factor BldG; Belongs to the anti-sigma-factor antagonist family.
 
   0.815
CBG72844.1
Putative regulator; PMID:15793135; db matches only to second domain: none with same 2*STAS domain architecture; may bind NTPs PMID:10662676; Belongs to the anti-sigma-factor antagonist family.
 
   0.778
CBG71535.1
Putative regulatory protein phosphatase.
  
     0.768
CBG72507.1
Putative anti sigma factor antagonist; PMID:6088674; PMID:15793135; Belongs to the anti-sigma-factor antagonist family.
 
   0.746
CBG71965.1
Putative disulfide oxidoreductase.
  
    0.719
SCAB_6291
Conserved hypothetical protein.
  
     0.712
CBG74387.1
Putative phosphatase.
  
     0.711
CBG73007.1
Putative regulatory protein phosphatase; PMID: 5561847.
  
     0.685
CBG75537.1
Conserved hypothetical protein.
  
     0.671
SCAB_6251
Putative anti-anti-sigma-factor; Belongs to the anti-sigma-factor antagonist family.
 
   0.659
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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