Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG71972.1Putative ATP/GTP-binding protein; Cluster 0209 with SCAB22251 and SCAB32831. (474 aa)    
Predicted Functional Partners:
CBG71973.1
Putative membrane protein.
 
     0.947
CBG71974.1
Putative integral membrane protein.
 
     0.947
CBG71971.1
Putative membrane protein.
 
  
 0.943
CBG71975.1
Putative membrane protein.
       0.777
CBG69338.1
Putative lipoprotein.
 
   
 0.764
CBG70380.1
Putative membrane protein.
 
   
 0.764
CBG72219.1
Putative DNA-binding protein.
  
     0.739
CBG71604.1
Conserved hypothetical protein.
  
   
 0.733
CBG69731.1
Conserved hypothetical protein; Cluster 0582 with SCAB84991.
  
     0.709
CBG69337.1
Putative ATP-binding integral membrane protein; MID:15828858; PMID:12589432; cluster 0525 with SCAB32791.
 
     0.703
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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