Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBG71979.1Putative secreted transglycosylase. (352 aa)    
Predicted Functional Partners:
CBG71978.1
Putative membrane protein.
       0.773
CBG69622.1
Putative sensory histidine kinase.
  
  
 0.759
gltB
Putative Ferredoxin-dependent glutamate synthase 1; PMID:7727752.
     
 0.759
CBG71980.1
Putative integral membrane protein.
     
 0.722
CBG71972.1
Putative ATP/GTP-binding protein; Cluster 0209 with SCAB22251 and SCAB32831.
 
  
 0.663
CBG71973.1
Putative membrane protein.
 
     0.658
nnrD
Putative carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of [...]
  
    0.597
CBG73744.1
Putative secreted protein; Contains possible coiled coil regions.
 
  
0.570
CBG73743.1
Putative secreted protein; Contains possible coiled coil regions.
 
  
0.566
CBG71977.1
Conserved hypothetical protein.
       0.565
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.