Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SCAB_4941Conserved hypothetical protein; PMID:2575701; PMID:11567009; PMID:11451671. (195 aa)    
Predicted Functional Partners:
CBG72520.1
Conserved hypothetical protein.
 
     0.674
CBG70249.1
Conserved hypothetical protein; PMID: 16208464.
 
     0.546
ectA
Putative L-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A.
       0.526
CBG74069.1
Putative aminotransferase.
       0.526
CBG74073.1
Conserved hypothetical protein.
       0.526
ectD
Putative ectoine hydroxylase; Compatible solute ectoine: osmoprotectant.
       0.517
CBG74070.1
Putative secreted solute-binding protein.
       0.503
SCAB_4931
Putative secretd protein.
       0.486
SCAB_5781
Conserved hypothetical protein.
 
     0.486
CBG74677.1
Conserved hypothetical protein.
 
     0.486
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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