Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAB_4951Putative ABC transporter ATP-binding subunit. (639 aa)    
Predicted Functional Partners:
CBG71996.1
Putative ABC transporter ATP-binding subunit.
  
  0.513
CBG71846.1
4.1.7.
  
     0.503
dnaK
Heat shock protein 70; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.480
dnaK-3
Putative heat shock protein 70 (fragment); Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.478
SCAB_4961
Putative secreted protein; PMID:14762003.
  
    0.476
CBG68283.1
Conserved hypothetical protein.
  
     0.434
dnaK-2
Heat shock chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.423
CBG71460.1
Putative polyketide synthase; PMID:14652074; PMID:10767533; many ~30% similar.
 
 
 0.410
SCAB_4941
Conserved hypothetical protein; PMID:2575701; PMID:11567009; PMID:11451671.
       0.404
SCAB_0611
Conserved hypothetical protein.
  
     0.402
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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