Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG72010.1Putative integral membrane protein. (433 aa)    
Predicted Functional Partners:
CBG72009.1
Putative sulphur transfer protein.
       0.874
CBG72008.1
Conserved hypothetical protein.
       0.759
CBG72011.1
Putative secreted protein.
       0.703
glnR
Putative transcriptional regulatory protein.
   
   0.641
CBG72005.1
Putative binding protein.
  
    0.616
CBG72004.1
Putative protease.
  
  
 0.602
CBG70175.1
Putative ATP-dependent DNA helicase.
  
 
 0.586
CBG72001.1
Putative two-component system sensor kinase.
   
   0.546
CBG72002.1
Putative two-component systen response regulator.
   
   0.546
CBG74177.1
Putative ScpA-like chromosome partitioning protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.512
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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