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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG72024.1Putative GntR-family transcriptional regulator. (298 aa)    
Predicted Functional Partners:
CBG72025.1
Putative hydrolase.
 
     0.768
CBG72023.1
Putative membrane protein.
       0.634
CBG72388.1
Putative GntR-family transcriptional regulator; PMID:12584005; PMID:14504830; PMID: 9620953; PMID:8366038; PMID:2657820.
  
     0.556
CBG74243.1
Putative GntR-family transcriptional regulator.
  
     0.499
CBG72803.1
Putative GntR-family regulator.
  
     0.470
CBG70870.1
Putative gntR-family transcriptional regulator.
  
     0.457
CBG72026.1
Putative aminoglycoside phosphotransferase.
       0.452
SCAB_5541
Putative GntR-family transcriptional regulator.
  
     0.439
CBG73157.1
Putative GntR-family regulator.
  
     0.419
CBG71507.1
Putative GntR-family transcriptional regulator.
  
     0.409
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.