Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG72035.1Putative regulatory phosphatase. (463 aa)    
Predicted Functional Partners:
SCAB_0811
Putative transposase; PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.
  
    0.760
CBG73172.1
Putative regulatory protein; Cluster 0572 with SCAB25161.
  
     0.740
CBG75279.1
Conserved hypothetical protein; PAS domain may indicate role in signal detection.
  
    0.735
CBG71160.1
Anti-anti-sigma factor BldG; Belongs to the anti-sigma-factor antagonist family.
 
   0.704
CBG70296.1
Conserved hypothetical protein; Lantibiotics biosynthesis.
  
     0.679
CBG69156.1
Putative ATP-binding protein; TTA-Leu codon(s) 13 may indicate regulation by BldA.
 
 
 0.674
CBG72844.1
Putative regulator; PMID:15793135; db matches only to second domain: none with same 2*STAS domain architecture; may bind NTPs PMID:10662676; Belongs to the anti-sigma-factor antagonist family.
 
   0.670
CBG71535.1
Putative regulatory protein phosphatase.
  
     0.645
CBG72508.1
Putative regulator of Sig15.
  
   0.642
CBG75927.1
Putative two-component sensor kinase.
 
  
 0.633
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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