Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phoR-2Phosphate two component system sensor kinase; PMID:12730372; PMID:16553869. (421 aa)    
Predicted Functional Partners:
phoP
Phosphate two component system response regulator; PMID: 12730372; PMID: 16553869.
 
 0.999
CBG69622.1
Putative sensory histidine kinase.
  
 
 0.909
CBG72050.1
Putative phosphate transport regulator; Plays a role in the regulation of phosphate uptake.
 
  
 0.885
CBG69998.1
Putative regulatory protein.
 
 
 0.823
CBG73171.1
Putative sensor kinase.
   
 
 0.813
afsQ1
Two component system response regulator; PMID: 1339426.
 
 
 0.810
CBG72558.1
Putative two-component system response regulator.
 
 
 0.810
CBG71532.1
Putative two-component response regulator.
 
 
 0.802
CBG73243.1
Putative two-component system response regulator; PMID:16079347.
 
 
 0.802
CBG69594.1
Two component system response regulator.
 
 
 0.800
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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