Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG72060.1Putative nucleotidyl transferase. (243 aa)    
Predicted Functional Partners:
CBG72061.1
Hydrophilic tail after putative membrane-span.
     
 0.866
CBG69466.1
Putative dTDP-4-dehydrorhamnose 3,5-epimerase; PMID:16441377; PMID:12644223; PMID:12825356.
 
  
 0.760
msiK
Putative maltose/cellubiose ABC transporter ATP-binding subunit; PMID: 9068663; PMID: 7494485; Belongs to the ABC transporter superfamily.
     
 0.649
CBG70563.1
Putative phosphomannomutase.
  
  
 0.642
CBG69303.1
Putative polysaccharide biosynthesis protein; PMID:8628239.
 
  
 0.569
CBG75353.1
Putative dTDP-glucose synthase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.551
CBG69447.1
Putative membrane-located undecaprenyl-phosphate transferase; PMID:12644223; PMID:12825356.
  
  
 0.515
CBG72933.1
Putative sugar transferase.
  
  
 0.515
CBG69448.1
UDP-glucose/GDP-mannose family dehydrogenase (putative secreted protein); PMID:12644223; PMID:12825356; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.512
CBG75339.1
Putative type I polyketide synthase; PMID:16207901; PMID:16085885; PMID:11094342; PMID:14652074; PMID:10873841; PMID:16806745; TTA-Leu codon(s) 962 may indicate regulation by BldA.
  
 
 0.479
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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