Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG72241.1Putative amidohydrolase. (576 aa)    
Predicted Functional Partners:
CBG72242.1
Putative aldehyde dehydrogenase.
       0.874
CBG72232.1
Putative amidohydrolase.
 
     0.754
CBG72233.1
Putative monooxygenase.
 
     0.700
CBG72240.1
Putative monooxygenase.
 
     0.659
CBG72239.1
Putative oxidoreductase.
       0.650
CBG72243.1
Conserved hypothetical protein.
       0.639
CBG70493.1
Conserved hypothetical protein.
 
   
 0.548
CBG72195.1
Putative amidohydrolase.
 
     0.527
CBG69734.1
Conserved hypothetical protein.
  
     0.492
CBG68726.1
Conserved hypothetical protein.
 
     0.474
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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