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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG72242.1Putative aldehyde dehydrogenase. (491 aa)    
Predicted Functional Partners:
CBG72241.1
Putative amidohydrolase.
       0.869
CBG72243.1
Conserved hypothetical protein.
  
 
 0.656
CBG72201.1
Putative oxidoreductase.
  
   0.574
CBG72232.1
Putative amidohydrolase.
  
    0.552
CBG72233.1
Putative monooxygenase.
       0.542
CBG72240.1
Putative monooxygenase.
       0.542
CBG72176.1
Putative citrate synthase; See also SCAB58791 citA; Belongs to the citrate synthase family.
  
 
 0.432
citA
Citrate synthase; PMID:11325948; see also SCAB51341 putative citrate synthase; Belongs to the citrate synthase family.
  
 
 0.432
CBG72239.1
Putative oxidoreductase.
  
   0.418
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.