Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG72253.1Conserved hypothetical protein; PMID:16511823. (281 aa)    
Predicted Functional Partners:
CBG72251.1
Conserved hypothetical protein; Hydrophilic N-term.
       0.708
fbiC
Putative FO synthase; PMID:16511823; PMID:14593448; putative SAM-binding domains.
 
  
 0.703
CBG68627.1
Putative luciferase-like monooxygenase.
  
     0.639
CBG74590.1
CONSERVED HYPOTHETICAL PROTEIN.
  
     0.555
CBG72252.1
Putative secreted beta-lactamase.
       0.553
cofE
Putative F420-0:gamma-glutamyl ligase; Bifunctional enzyme that catalyzes the GTP-dependent successive addition of two or more gamma-linked L-glutamates to the L- lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives, and the FMNH2- dependent reduction of dehydro-F420-0 to form F420-0.
 
  
 0.519
cofD
Putative LPPG:Fo 2-phopspho-L-lactate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP.
 
   
 0.512
CBG72240.1
Putative monooxygenase.
  
     0.486
CBG74589.1
Probable nonspecific lipid-transfer protein.
  
     0.475
CBG72218.1
Conserved hypothetical protein.
  
     0.435
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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