Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_5251Putative metal transport integral membrane protein. (306 aa)    
Predicted Functional Partners:
SCAB_5231
Putative nucleotide-binding ABC transporter subunit.
 
 
 0.978
CBG75592.1
Putative oligopeptide transport system (integral membrane and ATP-binding proteins); Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.978
SCAB_3761
Putative oligopeptide transport system (integral membrane and ATP-binding proteins).
 
 
 0.977
SCAB_5241
Putative transport system integral membrane protein.
 
 
 0.976
SCAB_5261
Putative secreted solute-binding protein.
 
 
 0.928
CBG68572.1
Putative ABC transporter ATP-binding subunit; Belongs to the ABC transporter superfamily.
 
 
 0.909
CBG75591.1
Putative nucleotide-binding ABC transporter subunit.
 
 
 0.909
CBG75144.1
Putative transport system integral membrane protein.
 
 
 0.899
CBG68570.1
ABC transporter permease protein.
 
 
 0.892
CBG69844.1
Oligopeptide transport integral membrane protein.
 
 
 0.892
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.