Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAB_5341Putative sugar transport integral membrane protein; Belongs to the binding-protein-dependent transport system permease family. (337 aa)    
Predicted Functional Partners:
SCAB_5331
Putative ATP-binding component of ABC transporter.
 
 0.995
SCAB_5351
Putative substrate-binding component of ABC transporter.
 
 0.991
CBG72890.1
Putative carbohydrate-binding protein; PMID:3011794.
 
 0.854
CBG68486.1
Putative D-ribose-binding protein precursor.
 
 
 0.852
CBG68484.1
Putative probable ABC transporter ATP-binding protein.
 
 
 0.848
CBG74311.1
Putative ribose transporter ATP-binding subunit.
 
 
 0.834
rbsA
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.831
CBG74903.1
Putative sugar ABC transport system, ATP-binding protein; TTA-Leu codon(s) 144 may indicate regulation by BldA.
 
 
 0.826
SCAB_9001
Putative ABC transporter ATP binding protein.
 
 
 0.825
SCAB_5321
Putative LacI-family transcriptional regulator.
 
    0.817
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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