Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAB_5371Putative secondary metabolism monooxygenase. (97 aa)    
Predicted Functional Partners:
CBG69007.1
Putative levansucrase precursor; Belongs to the glycosyl hydrolase 68 family.
  
   
 0.723
SCAB_5351
Putative substrate-binding component of ABC transporter.
  
    0.659
SCAB_3481
Putative levanase.
 
   
 0.624
scrK
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
       0.515
CBG69879.1
Putative exported protein.
 
     0.466
SCAB_5331
Putative ATP-binding component of ABC transporter.
  
  
 0.424
SCAB_5341
Putative sugar transport integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.424
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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