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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG72482.1Putative ABC transporter transmembrane subunit. (845 aa)    
Predicted Functional Partners:
CBG72483.1
Putative ABC transporter ATP-binding subunit.
 
  
 0.927
CBG72462.1
Putative ABC transport system ATP-binding subunit.
 
  
 0.819
CBG74667.1
35% aa_d to S. aureus vraD many similar putative ABC transporter components exist.
 
  
 0.819
CBG74780.1
Putative ABC transport system ATP-binding protein.
 
  
 0.819
CBG75937.1
Putative ABC transport system, ATP-binding protein.
 
  
 0.791
CBG71085.1
Putative ABC transporter ATP-binding subunit.
 
  
 0.675
CBG71094.1
Putative ABC transporter ATP-binding subunit.
 
  
 0.656
SCAB_1051
Putative ABC transport system ATP binding protein.
 
  
 0.577
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.