Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG72559.1Putative two-component system histidine kinase. (695 aa)    
Predicted Functional Partners:
CBG72558.1
Putative two-component system response regulator.
 
 0.998
lpqB
Putative lipoprotein.
 
  
 0.975
afsQ2
Two component system sensor kinase; PMID: 1339426.
 
 
0.929
CBG69622.1
Putative sensory histidine kinase.
  
 
 0.909
CBG73171.1
Putative sensor kinase.
   
 
 0.813
CBG72561.1
Conserved hypothetical protein.
 
    0.788
CBG72554.1
Putative membrane protein.
 
     0.786
CBG72556.1
Putative integral membrane protein.
 
   
 0.786
CBG72555.1
Putative integral membrane protein.
 
     0.785
mtnA
Putative translation initiation factor; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
       0.785
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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