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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG72613.1Putative nitrate extrusion protein. (460 aa)    
Predicted Functional Partners:
narG2
Nitrate reductase alpha chain NarG2; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.994
CBG68244.1
Putative nitrate/nitrite transporter protein.
  
0.993
narH2
Nitrate reductase beta chain NarH2.
 
 
 0.992
narI2
Putative nitrate reductase delta chain NarI2.
 
 
 0.992
CBG73248.1
Putative nitrite/sulphite reductase large subunit; PMID:2445993; PMID:2200672; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.980
CBG73247.1
Putative nitrite/sulphite reductase small subunit; PMID: 1987123.
 
 
 0.974
SCAB_1941
Putative nitrite reductase large subunit NirB.
 
 
 0.945
narJ2
Putative nitrate reductase delta chain NarJ2.
 
  
 0.927
CBG72614.1
Putative transcriptional regulator.
 
  
 0.924
SCAB_1611
Putative 2-nitropropane dioxygenase.
  
 
 0.905
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.