STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG73209.1Conserved hypothetical protein. (147 aa)    
Predicted Functional Partners:
lepA
Putative GTP-binding elongation factor; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
  0.710
CBG70604.1
Putative leucine-rich repeat protein; TTA-Leu codon(s) 58 may indicate regulation by BldA.
   
 0.607
CBG70605.1
Putative GTPase.
   
 0.607
CBG71380.1
Conserved hypothetical protein.
   
 0.561
SCAB_4911
Conserved hypothetical protein.
   
 0.561
CBG73646.1
Putative membrane protein.
   
 0.561
CBG75508.1
Putative membrane protein.
   
 0.561
CBG73208.1
Putative lysine biosynthesis protein; Belongs to the DapA family.
       0.557
cdsA
Putative phosphatidate cytidylyltransferase.
  
    0.525
CBG69892.1
Putative ABC transporter; PMID: 15870461; PMID: 8628239.
  
 
   0.473
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.