STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG74097.1Putative membrane protein. (188 aa)    
Predicted Functional Partners:
CBG74094.1
Putative membrane protein.
       0.847
CBG74095.1
Conserved hypothetical protein.
       0.847
CBG74096.1
Putative membrane protein.
       0.847
CBG74093.1
Conserved hypothetical protein.
 
     0.824
CBG74092.1
Conserved hypothetical protein.
       0.708
CBG71630.1
Putative membrane protein.
  
     0.670
CBG70534.1
Putative membrane protein.
  
     0.669
CBG71048.1
Putative secreted protein.
  
     0.658
CBG73622.1
Conserved hypothetical protein.
  
     0.615
CBG68453.1
Putative lipoprotein.
  
     0.614
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.