STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG74267.1Putative penicillin acylase. (937 aa)    
Predicted Functional Partners:
CBG74266.1
Conserved hypothetical protein.
       0.697
SCAB_5851
Putative secreted protein.
 
      0.596
CBG75810.1
Putative tetR-family regulatory protein.
  
     0.475
CBG75795.1
Conserved hypothetical protein; PMID:9387157.
  
     0.460
CBG75130.1
Conserved hypothetical protein.
  
     0.455
SCAB_1041
Putative ABC transport system integral membrane protein (fragment).
 
    0.412
CBG71310.1
Conserved hypothetical protein.
  
     0.405
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.