STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_8031Putative threonine dehydratase. (326 aa)    
Predicted Functional Partners:
ilvN
Acetolactate synthase small subunit.
  
 
 0.972
CBG70269.1
Putative pyridoxal-phosphate dependent enzyme.
 
 
 0.952
SCAB_3581
Putative oxidoreductase.
 
 
 0.946
CBG69811.1
Putative acetolactate synthase; PMID: 10708373.
 
 0.944
CBG75842.1
Putative acetolactate synthase large subunit; Belongs to the TPP enzyme family.
 
 0.943
thrC
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
  
 
0.942
CBG68793.1
Putative TPP-requiring enzyme; Belongs to the TPP enzyme family.
 
 0.940
CBG72086.1
Putative threonine synthase.
  
 
 0.940
CBG72833.1
Putative acetolactate synthase; PMID:2989781; Belongs to the TPP enzyme family.
 
 0.940
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily.
 
 
 0.939
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.