STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG75079.1Conserved hypothetical protein. (531 aa)    
Predicted Functional Partners:
solA-2
Putative sarcosine oxidase.
       0.759
CBG69680.1
Putative secreted polyamine-binding transport system protein.
 
   
 0.726
CBG69690.1
Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.716
CBG69678.1
Putative polyamine transport protein.
 
    0.651
CBG69689.1
Putative transcriptional regulator.
 
     0.650
CBG69677.1
Putative polyamine transport protein.
 
     0.634
CBG75069.1
Putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.598
SCAB_3811
Putative transcriptional regulatory protein.
 
     0.592
CBG75080.1
Conserved hypothetical protein.
  
    0.564
CBG75081.1
Putative hydrolase.
    
  0.467
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.