STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG75867.1Putative oxidoreductase. (468 aa)    
Predicted Functional Partners:
CBG75866.1
Putative oxidoreductase.
  
 0.990
CBG75868.1
Probable carbohydrate kinase.
 
  
 0.935
CBG70707.1
Putative glycerol phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
0.912
CBG74314.1
Putative glycerol-3-phosphate dehydrogenase.
    
 0.912
gpdA
Glycerol-3-phosphate dehydrogenase; Cluster 0583 with SCAB79801; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.910
gpsA
Putative glycerol-3-phosphate dehydrogenase; Cluster 0583 with SCAB26541; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.910
CBG68463.1
Putative glycerol dehydrogenase.
    
  0.901
dhaM
Putative dihydroxyacetone kinase, phosphotransferase component; PMID:11350937.
 
  
 0.880
dhaK
Putative dihydroxyacetone kinase component; PMID:12813127; PMID:15476397.
 
  
 0.856
dhaL
Putative dihydrocyacetone kinase component; PMID:11350937.
 
  
 0.853
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.